AIDO.ModelGenerator and Expanded Foundation Model Suite
AIDO.ModelGenerator and Expanded Foundation Model Suite
GenBio AI just released an update to AIDO.ModelGenerator, a software package for adapting, benchmarking, and applying biological foundation models across multiple tasks and data types. What it is AIDO.ModelGenerator supports both GenBio AI models and popular open-source models like Enformer, ESM2, and scFoundation. It enables workflows for structure prediction, protein modeling, single-cell analysis, and spatial transcriptomics. What’s new New models: • AIDO.StructurePrediction – biomolecular structure prediction across proteins, RNA, DNA, and ligands • AIDO.Protein-RAG – protein modeling with MSA and structure input • AIDO.Tissue – spatially aware cell modeling New benchmark datasets: • Cell age prediction • Cell-type classification • Cellular perturbation (Tahoe-100M) Utilities for distributed training and hyperparameter tuning Use cases Includes tutorials for: • mRNA vaccine design • Predicting protein complexes • Simulated gene knockouts for target discovery
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